Biological Sequence Substitution Models for Julia
Release status:
Development status:
SubstitutionModels.jl provides facilities to model the substitution process of
biological sequences. Such models are essential for the analysis of sequence
evolution, phylogenetics, and simulation.
We first aim to provide the most common substitution models
used in the literature, but aim to build an extendable framework using julia’s
type system and traits, so as custom model types can be created and used.
The current release version can be installed
from the Julia REPL:
using PkgPkg.add("SubstitutionModels")
We appreciate contributions from users including reporting bugs, fixing issues,
improving performance and adding new features.
Please go to the contributing section of the documentation
for more information.
If you have a question about
contributing or using this package, you are encouraged to use the
Bio category of the Julia discourse
site.