项目作者： cannin

项目描述：

  Tutorials for Pathway Commons (https://pathwaycommons.org) network analysis tools. Prepared for the Computational Systems Biology of Cancer course at Institut Curie

高级语言： R

项目主页：

项目地址: git://github.com/cannin/sysbiocancer2019.git

创建时间： 2019-09-19T23:34:39Z
项目社区：https://github.com/cannin/sysbiocancer2019
开源协议：
下载

Network Analysis Tutorials: Computational Systems Biology of Cancer 2019: Institut Curie

This website pulls together installation for a number of network analysis tools related to Pathway Commons (http://pathwaycommons.org). Primary websites and documentation should be consulted for each tool.

Tools Covered

sbgnvizShiny: https://github.com/cannin/sbgnvizShiny
EnrichmentMap: Merico D, et al., 2010; Cytoscape plugin: https://www.baderlab.org/Software/EnrichmentMap
CausalPath: https://github.com/PathwayAndDataAnalysis/causalpath
NetBox: Cerami E, et al., 2010; netboxr

Running

Click the Launch Binder button at the top
Run the “main.R” script to retrieve the individual demo specific files
Run scripts for specific demos

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