Cultural evolution in long-billed hermits

Creating long-billed hermit song cultural evolution trees and analyzing
evolutionary patterns

Updated on 2021-02-06 11:39:31

Table of contents

• General info
  • Analyses
    • To do list
      • Contact

General info

Code used for creating long-billed hermit song cultural evolution trees
and analyzing evolutionary patterns.

Analysis

• Optimizing cost for MAFFT
  alignments
• Aligning song sequences with mafft and
  prank
• Revbayes models done
• Making trees with RevBayes
• Run revbayes posterior predictions (P3)
• Summarize results revBayes trees
• MCMC, ML and P3
  diagnostics
• diagnostic
  plots
• tree topology
  diagnostics

In progress

• Tree topology diagnostics

To-do list

• Run RevBayes with no fossils
• Check aligment convergence

Status

Project is: in progress

Contact

Created by Marcelo Araya-Salas