This software allows the sorting of high-throughput sequencing data after alignment from SAM files. mpiSORT relies on the Message Passing Interface (MPI) standard to perform the parallelisation of the sorting processing over multiple cores and nodes of high performance computing clusters.
Before going further don’t use this tool unless you know what you are doing!
This program has been developed by Frederic Jarlier from Institut Curie and Nicolas Joly from Institut Pasteur with the help of students from Paris Descartes University and supervised by Philippe Hupé from Institut Curie.
Contacts: frederic.jarlier@curie.fr, philippe.hupe@curie.fr
Jarlier F, Joly N, Fedy N et al. QUARTIC: QUick pArallel algoRithms for high-Throughput sequencIng data proCessing. F1000Research 2020, 9:240 (https://doi.org/10.12688/f1000research.22954.2)
