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项目作者： CSpyridakis

项目描述 ：
Introduction in Parallel and Distributed Computer Architecture. Speed up Hamming distance and ω statistic calculation time.
高级语言： C
项目地址: git://github.com/CSpyridakis/HOC.git
创建时间： 2018-03-10T09:08:22Z
项目社区：https://github.com/CSpyridakis/HOC
开源协议：MIT License
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Size" class="reference-link">HOC MIT license Size

This repository contains two separate projects, both of them are about an educational introduction in Parallel and Distributed Computer Architecture.

Projects

  • Hamming Distance
    In this project, a serial NON-optimized calculation of Hamming distance between two randomly generated arrays of equal length is implemented. Then using pthreads and OpenMP API try to speed up the calculation time of this operation. The same process is repeated for different array lengths, word lengths, threads number, and some useful results are exported during this procedure.
  • ω Statistic
    Along the same lines, there is the implementation of the serial, NON-optimized, and simplified ω statistic calculation among a population sample of DNA sequence. Then, the same calculation is repeated using Streaming SIMD Extensions (SSE) and Message Passing Interface (MPI).