项目作者: lgautier

项目描述 :
Efficient handling of FASTQ files from Python
高级语言: Python
项目地址: git://github.com/lgautier/fastq-and-furious.git
创建时间: 2017-01-29T18:27:38Z
项目社区:https://github.com/lgautier/fastq-and-furious

开源协议:MIT License

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fastq-and-furious

(… because it turned out that the performance bottleneck for an
algorithm-focused implementation of bottom-sketches (MinHash sketches)
was the parsing of FASTQ files).

Project web page: https://lgautier.github.io/fastq-and-furious/

Python package
Pypi release

Efficient and flexible parsing of FASTQ files(*) from Python. It is about as fast as the fastest parser with C extensions, but it is substantially more flexible.