项目作者: santiagosnchez

项目描述 :
Calculates Kn/Ks distances from two CDS sequences
高级语言: Python
项目地址: git://github.com/santiagosnchez/DistKnKs.git
创建时间: 2018-12-04T05:22:36Z
项目社区:https://github.com/santiagosnchez/DistKnKs

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DistKnKs

Calculates Kn/Ks distances from two CDS sequences.

Description

This program will read two aligned CDS sequences (see CodonAlign) and measure synonymous (Ks) and nonsynonymous (Kn) distances applying K80 and JC correction for hidden mutations.

A nice feature is that you can specify any codon table by using the --codon_table argument, which will be retrieved from the NCBI translation table website.