Nextflow pipeline for analysis of direct RNA Nanopore reads
Master of Pores is a pipeline written in Nextflow DSL2 to analyze Nanopore data.
It can handle reads from direct RNAseq, cDNAseq, DNAseq etc.
The name is inspired by the Metallica’s Master Of Puppets, the logo and the images are an homage to Akira Toriyama
Please install nextflow and singularity or docker before.
Then download the repo:
git clone --recurse-submodules https://github.com/biocorecrg/master_of_pores.git
The documentation is available at https://biocorecrg.github.io/master_of_pores/MOP4-dev/
Please open an issue if you encounter any issues / troubles.
However, please go over the previous issues (including closed issues) before opening a new issue, as your same exact question might have been already answered previously. Thank you!
If you use this tool, please cite our papers:
